Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PGR

Cell type

Cell type Class
Uterus
Cell type
Ishikawa
Primary Tissue
Uterus
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
endometrial adenocarcinoma
disease state
endometrial adenocarcinoma
cell line
Ishikawa
cell modification
exogenous PR overexpression
passages
20-26
cell type
epithelial-like
growth mode
adherent
chip antibody
PR H190 (Santa Cruz)
treatment
PR-immunoprecipitated DNA from untreated cells

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
70566965
Reads aligned (%)
97.3
Duplicates removed (%)
8.0
Number of peaks
1294 (qval < 1E-05)

hg19

Number of total reads
70566965
Reads aligned (%)
96.7
Duplicates removed (%)
9.4
Number of peaks
1737 (qval < 1E-05)

Base call quality data from DBCLS SRA